MultiVeloVAE
Main
Usage
API
Notebooks
Single scRNA-seq dataset
Single multi-omic dataset (EB)
Single multi-omic dataset (mouse brain)
Integration of two multi-omic datasets with (de)coupling
Integration of two multi-omic datasets with differential test
Integration of scRNA and multi-omic datasets
Preprocessing of single multi-omic dataset
Preprocessing of two multi-omic datasets for integration
MultiVeloVAE
Index
Index
_
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A
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D
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F
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I
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K
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M
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R
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S
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T
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V
_
__init__() (multivelovae.VAEChrom method)
A
aggregate_peaks_10x() (in module multivelovae)
D
decoupling_plot() (in module multivelovae)
differential_dynamics() (in module multivelovae)
differential_dynamics_plot() (in module multivelovae)
dynamic_plot() (in module multivelovae)
F
filter_genes_dispersion() (in module multivelovae)
I
is_outlier() (in module multivelovae)
K
knn_smooth_chrom() (in module multivelovae)
M
module
multivelovae
multivelovae
module
R
regress_out() (in module multivelovae)
S
scatter_plot() (in module multivelovae)
T
tfidf_norm() (in module multivelovae)
V
VAEChrom (class in multivelovae)
velocity() (in module multivelovae)
velocity_embedding_stream() (in module multivelovae)
velocity_graph() (in module multivelovae)